PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s911131g005
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 194aa    MW: 21124.8 Da    PI: 5.2588
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s911131g005genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.41e-171163157
                NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeeke 57
                       +ppGfrFhPtdeel+ +yLkkk++ +k++l evi+e+d++kvePwdL+  +++  + 
  PDK_30s911131g005 11 VPPGFRFHPTDEELLLFYLKKKISFEKFDL-EVIREIDLNKVEPWDLQ-VISS--ST 63
                       69****************************.99**************8.3322..22 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-17760IPR003441NAC domain
PROSITE profilePS5100512.50311164IPR003441NAC domain
PfamPF023651.1E-71266IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MAASSSSNSG VPPGFRFHPT DEELLLFYLK KKISFEKFDL EVIREIDLNK VEPWDLQVIS  60
SSTSFFAVFS TLWFKLQVIS SCTSLLPRSN GLSYAHVQVQ DLLTNHRPTG YDFSVLPTES  120
SAMVKPCEGG LEVGAACEGM RHVGGDGRDR SPNAWAVLDG IDGRFGGAGG AAVQQMNQIS  180
GQRGGEMELW GYGK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786561.18e-62protein BEARSKIN1-like
TrEMBLA0A2H3XNR72e-60A0A2H3XNR7_PHODC; protein BEARSKIN1-like
STRINGXP_008786561.13e-61(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.14e-27NAC domain containing protein 70