PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s911261g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bZIP

Protein Properties

Length: 468aa MW: 52383 Da PI: 8.4909

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s911261g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.2	6.2e-07	150	212	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke kr r +NRe+Ar +R++ eeL++kv+ L+ +Nk k e e ke+ +lk+ + PDK_30s911261g001 150 EKEAKRLHRILSNRESARQAIRRRQVIREELTKKVADLSLKNKNIKMEKELVMKEYLSLKDTN 212 899*********************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-8	150	214	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.898	152	215	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.63E-5	154	210	No hit	No description
CDD	cd14702	3.41E-9	155	205	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence Send to blast
MEEEARRRAW GSFGGARWSP SSDRGGSSST SRSCLPREQW GPDPIVEMEL DAAQALAEMA 60 ILEEKEDKRI EDDGSPSRFR GVSFREGKFW GLEHEHLVGD HQEVNKAVKD RVKERKSGQQ 120 ISEFPKADIT CPTSHTPSSG RVKQNLTEAE KEAKRLHRIL SNRESARQAI RRRQVIREEL 180 TKKVADLSLK NKNIKMEKEL VMKEYLSLKD TNKQLKEQIS KAMKCEFGTS AETMSMQVEI 240 SASSSTNLPP MIYSRLPLVP YVWPPWPIST ITRPCHEHDS LGIFSGLRPH FNMPPCAWFY 300 PSLHEIPGSC SQHSHSSEER HEDPVSIRHG LGQSYGALDY EEKAMMHSSK ETDLSSLPAI 360 VTQKEENATT DNQGLLATIP TEHQMSRHCP DKLVHISSHC RTSVSSSDAK GGPVTGHDDG 420 TSPEKSGGAC SRPNEKLLIT AAAAQARKRR KELTKLKQLH GRQAGLRS

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence Send to blast

MEEEARRRAW GSFGGARWSP SSDRGGSSST SRSCLPREQW GPDPIVEMEL DAAQALAEMA  60
ILEEKEDKRI EDDGSPSRFR GVSFREGKFW GLEHEHLVGD HQEVNKAVKD RVKERKSGQQ  120
ISEFPKADIT CPTSHTPSSG RVKQNLTEAE KEAKRLHRIL SNRESARQAI RRRQVIREEL  180
TKKVADLSLK NKNIKMEKEL VMKEYLSLKD TNKQLKEQIS KAMKCEFGTS AETMSMQVEI  240
SASSSTNLPP MIYSRLPLVP YVWPPWPIST ITRPCHEHDS LGIFSGLRPH FNMPPCAWFY  300
PSLHEIPGSC SQHSHSSEER HEDPVSIRHG LGQSYGALDY EEKAMMHSSK ETDLSSLPAI  360
VTQKEENATT DNQGLLATIP TEHQMSRHCP DKLVHISSHC RTSVSSSDAK GGPVTGHDDG  420
TSPEKSGGAC SRPNEKLLIT AAAAQARKRR KELTKLKQLH GRQAGLRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	446	451	RKRRKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008776159.2	0.0	uncharacterized protein LOC103696343
TrEMBL	A0A2H3WZS2	0.0	A0A2H3WZS2_PHODC; uncharacterized protein LOC103696343
STRING	XP_008776159.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3165	34	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-17	bZIP family protein