PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s912911g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 222aa    MW: 24977.4 Da    PI: 8.3687
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s912911g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.13.2e-1734702258
                       EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
               WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                       rsYYrC+ ++C++kk+vers edp++++itYeg H h
  PDK_30s912911g001 34 RSYYRCSNPRCNAKKQVERSIEDPEMLIITYEGLHLH 70
                       9**********************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.1E-83272IPR003657WRKY domain
PfamPF031061.6E-123270IPR003657WRKY domain
SuperFamilySSF1182902.22E-133371IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.9E-153371IPR003657WRKY domain
PROSITE profilePS5081114.8833473IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MTKWWSCMHV PIFTPIIKYA HRKILPLLIC LPNRSYYRCS NPRCNAKKQV ERSIEDPEML  60
IITYEGLHLH YAYSHFLFPQ RQGNSATSLP APKKPKVQQA QDLENPKVRP TKPEASTTTQ  120
QQQQQQQLVI TGEKSSQGRL LGDAPPSRVL REEGIPADDN AQCPQGLLED IVPLLVRNPC  180
NSTTSAYDPQ TSSQATSLHY PSSHSWPPDS AHLDVGILSN MI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008785604.11e-126probable WRKY transcription factor 49
TrEMBLA0A2H3XLJ01e-125A0A2H3XLJ0_PHODC; probable WRKY transcription factor 49
STRINGXP_008785604.11e-126(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75253551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-17WRKY DNA-binding protein 49