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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PDK_30s914051g001 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family | Nin-like | ||||||||
| Protein Properties | Length: 193aa MW: 21755.6 Da PI: 10.5414 | ||||||||
| Description | Nin-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | RWP-RK | 39.2 | 1.4e-12 | 72 | 117 | 2 | 47 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47
k+is e+l++ +lp k AA +Lg+++T+ +CR +GIk WP+
PDK_30s914051g001 72 RKNISREKLQQLSYLPRKLAAWKLGMSVTTFRLRCRDHGIKPWPYK 117
69******************************************97 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51519 | 12.741 | 57 | 145 | IPR003035 | RWP-RK domain |
| Pfam | PF02042 | 6.1E-11 | 74 | 118 | IPR003035 | RWP-RK domain |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 193 aa Download sequence Send to blast |
AAENVPSQTV EITKSRIGES DLPPETDDLG GSSQLSSGYA TGTLPVSGTV GRGGLSGPKK 60 KKTEIAAQRE RRKNISREKL QQLSYLPRKL AAWKLGMSVT TFRLRCRDHG IKPWPYKQRV 120 NRCTQNTRHS SSTIEVHKLE ARMEEMRQSH QIEMQSLRAQ LNNIVSLIHR FVPSQVPDTF 180 KSRRDDDDAA FDL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 57 | 63 | PKKKKTE |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_026657427.1 | 1e-109 | uncharacterized protein LOC113461522 | ||||
| TrEMBL | A0A3Q0HVF1 | 1e-107 | A0A3Q0HVF1_PHODC; uncharacterized protein LOC113461522 | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G66990.1 | 1e-06 | RWP-RK domain-containing protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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