PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s916311g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 332aa    MW: 37100.8 Da    PI: 8.6789
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s916311g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.7e-104687445
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                        k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  PDK_30s916311g001 46 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 87
                       5888*************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.4E-83690No hitNo description
SMARTSM003381.0E-843106IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384589IPR004827Basic-leucine zipper domain
PfamPF001706.4E-74787IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-74790No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141446.1E-35129205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MADTSPRTDT STDVDTDDKS QRLEQGQAAI AAASDSSDKS KDKMDQKTLR RLAQNREAAR  60
KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMGGN GALAFDMEYA  120
RWLEEHNRQI NELRAAVNSH ASDNDLRTIV DSIMAHYDEI FRLKSVAAKA DVFHMLSGMW  180
KTPAERCFLW LGGFRSSELL KLLASQLEPL TEQQLMGICN LQQSSQQAED ALSQGMEALQ  240
QSLAETLSSG SLGPAGSSGN VANYMGQMAM AMGKLGTLES FLRQADNLRQ QTLQQMIRIL  300
TTRQSARALL AIHDYFSRLR ALSSLWLARP RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786823.10.0transcription factor TGA2.3-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2H3XPE50.0A0A2H3XPE5_PHODC; transcription factor TGA2.3-like isoform X1
STRINGXP_008786823.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-149bZIP family protein