PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s941391g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 122aa MW: 13076.5 Da PI: 8.6429

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s941391g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	62.4	8.2e-20	13	46	2	35
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCka 35 +e al+cprCdstntkfCy+nnyslsqPr+fC + PDK_30s941391g003 13 PEPALNCPRCDSTNTKFCYFNNYSLSQPRHFCSG 46 67899***************************76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-19	1	45	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.6E-17	16	45	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	15.734	17	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MTDRARLAKI PQPEPALNCP RCDSTNTKFC YFNNYSLSQP RHFCSGVDEG AFAKATGSGL 60 ITQLASVKME DNQHGLRLPR QYLGVPRNDQ YWGGSSGGGT SSGSGWPTNL SGFNSSSAGN 120 LL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010920614.1	1e-29	dof zinc finger protein DOF5.1
TrEMBL	A0A2H3YRJ6	1e-22	A0A2H3YRJ6_PHODC; dof zinc finger protein DOF5.1-like isoform X1
STRING	XP_008802760.1	2e-23	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	6e-24	OBF-binding protein 3