PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s943431g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family EIL
Protein Properties Length: 651aa    MW: 71884.8 Da    PI: 4.8905
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s943431g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3519.31.7e-158754541354
                        XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                        eel++rmw+d+m+lkrlke+++++ +++ a ++++++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr
  PDK_30s943431g001  75 EELERRMWRDRMRLKRLKEQQQNKNKEQGA-ADSARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLR 165
                        8*********************98866655.99999******************************************************** PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS
               EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184
                        +WWkekv+fdrngpaai+kyqa+n i++ +++++  +++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+Gke+ww+el
  PDK_30s943431g001 166 GWWKEKVRFDRNGPAAIAKYQAENSIPGANNESNP-GTASPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPSGKEEWWPEL 256
                        ****************************9999988.******************************************************** PP

                        T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX....XXXXX CS
               EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss....slrkq 270
                        g++kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+akes+++l+v++qee+ + +++++  ++    s  ++
  PDK_30s943431g001 257 GIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKESATWLAVVKQEEEFYMKLHPDarPPqssgSGVTG 348
                        *******************************************************************************6522544444446 PP

                        XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX CS
               EIN3 271 spkvtlsceqkedvegkkeskikhvqavktta..........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrg 336
                        + +++ s++ ++dveg ++ k ++v ++k++                           ++++++kr    +e++ + +++v  tc++ q+ +
  PDK_30s943431g001 349 AISFNSSSG-EYDVEGVDDGKSEEVGNQKAAVdgnafnliaaagnenfvasaplkeetDVEFIQKRT--AAEPELMLNQRV-FTCDNMQCVH 436
                        666666665.99***88888889999999887999*********************99999999997..89*****99976.********** PP

                        .XXXXXXXXXXXXXXXXX CS
               EIN3 337 setelifadknsisqney 354
                        ++++++fad+ns++ ++y
  PDK_30s943431g001 437 NDVRFGFADRNSRNAHQY 454
                        ****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.5E-13375326No hitNo description
Gene3DG3DSA:1.10.3180.106.7E-75199335IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.7E-61205330IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0009873Biological Processethylene-activated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MMGGPLMDGM IFSGSQNNYV PLMPSANEKS ISFGALLNPP IMGDAILGEG DLVDPPSENF  60
AEAGEEESDD DIDIEELERR MWRDRMRLKR LKEQQQNKNK EQGAADSARQ RQSQEQARRK  120
KMSRAQDGIL KYMLKMMEVC KAQGFVYGII PEKGKPVSGA SDNLRGWWKE KVRFDRNGPA  180
AIAKYQAENS IPGANNESNP GTASPHSLQE LQDTTLGSLL SALMQHCDPP QRRFPLEKGV  240
APPWWPSGKE EWWPELGIPK DQGPPPYKKP HDLKKAWKVS VLTAVIKHMS PDIEKIRRLV  300
RQSKCLQDKM TAKESATWLA VVKQEEEFYM KLHPDARPPQ SSGSGVTGAI SFNSSSGEYD  360
VEGVDDGKSE EVGNQKAAVD GNAFNLIAAA GNENFVASAP LKEETDVEFI QKRTAAEPEL  420
MLNQRVFTCD NMQCVHNDVR FGFADRNSRN AHQYLCKNQN SLPQGISPTS GGMRMNENKP  480
PVFFMPLNAQ PNATGLGSSV NPINISGLGI PADGQKTISE LMSFYENSIN PNKNQGGMNQ  540
GGMTPGGMTM LDGQDSLQQK LQMEDNFFGQ GTGTGGTVFE EVGNLMQQQQ QFYGREDMMP  600
VEQQLGNQPS DLGTDIDFGS GFSMPTMGYA DALQKGMGEL GQKPEYPSWF F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-762033361134Protein ETHYLENE INSENSITIVE 3
4zds_B1e-762033361134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00367DAPTransfer from AT3G20770Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008790465.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3M00.0EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLA0A2H3XY140.0A0A2H3XY14_PHODC; ETHYLENE INSENSITIVE 3-like 1 protein
STRINGXP_008790465.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-168EIL family protein
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]