PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s953701g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family HB-other
Protein Properties Length: 180aa    MW: 19770.2 Da    PI: 5.3763
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s953701g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox36.67.7e-121201482755
                        HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
           Homeobox  27 aeereeLAkklgLterqVkvWFqNrRake 55 
                        a+++  LAk+l+L  rqV vWFqNrRa++
  PDK_30s953701g001 120 AKQKLALAKQLNLRPRQVEVWFQNRRARH 148
                        467889*********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003890.002395155IPR001356Homeobox domain
CDDcd000861.26E-10105152No hitNo description
PfamPF000462.6E-9120148IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.5E-11120148IPR009057Homeodomain-like
PROSITE profilePS5007111.548121151IPR001356Homeobox domain
SuperFamilySSF466895.99E-10121154IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MELGLSLGEA PAKAFFAAEK AGVKGRGGLV LGFGMGLGVG LGGRREEEEE EEEEEREGGE  60
ERCSAEPPVQ LDLLPLAPVP RRSTPQLGFP WAPETRNWEV STRGFDVNQT PSAEVEEGAA  120
KQKLALAKQL NLRPRQVEVW FQNRRARHIH EHHFCDAFGS TKYVLSLGGS HLFDRPLGTA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026661053.12e-77homeobox-leucine zipper protein HOX11-like
TrEMBLA0A3Q0I2F64e-76A0A3Q0I2F6_PHODC; homeobox-leucine zipper protein HOX11-like
STRINGXP_008791862.12e-76(Phoenix dactylifera)