PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s959551g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 341aa    MW: 37236.9 Da    PI: 5.8037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s959551g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.2e-14137188155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++Y+k+L+
  PDK_30s959551g002 137 QRMSHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINYVKELE 188
                        79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.26E-15135192No hitNo description
PROSITE profilePS5088815.986136187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-14137203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.11E-17137203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-11137188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-11142193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MALDAVVFPQ DLFGCTLKEI CTVEGGAWNY GFGGVEEKGV VLECEMGGGG GGGGGGGGCG  60
VRQDQGRGRV DGVHGNWDSF CSSLVQNLEE WDVNSSPPSE TGAKDEGFVR GQEAAVGGRR  120
KRRRTKSSKN KEEVEYQRMS HIAVERNRRK QMNEYLAVLR SLMPPSYVQR GDQASIIGGA  180
INYVKELEQL LQSLEAQKRL KQRSDTAPFA DFFTFPQYSS CSSCSTNSTA TTAAATATNN  240
TSKVMAENQS AVADIEVTMV ESHANLKVLS RRRPKQLLKL VVGLQNLQLT TLHLNVTTMD  300
QMVLFSFSLK VEDDCQYTSV DEIATAVYQM VGKIQEDFGL N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119123RKRRR
2119124RKRRRT
3137148RMSHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008776945.20.0transcription factor bHLH96-like
TrEMBLA0A2H3X1M10.0A0A2H3X1M1_PHODC; transcription factor bHLH96-like
STRINGXP_008776945.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-54bHLH family protein