PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s960771g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 151aa    MW: 16840 Da    PI: 9.3572
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s960771g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.5e-143075550
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                       ++++r+ +NRe+ArrsR RK++ ++ L   v  L++eN++    l 
  PDK_30s960771g001 30 RKQKRMLSNRESARRSRMRKQKHMDDLMAQVGHLKKENRQILTALH 75
                       79************************************98776555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-101971No hitNo description
SMARTSM003381.8E-172690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7262870IPR004827Basic-leucine zipper domain
PfamPF001704.3E-113073IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-123081No hitNo description
CDDcd147021.13E-183181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MASSTGTSSG SSQLPNSGSE EDLQASMHQR KQKRMLSNRE SARRSRMRKQ KHMDDLMAQV  60
GHLKKENRQI LTALHVTTQH YLDVEAGNSV LRTQMMELNT RLQSLNEILC CMNGSGNHGF  120
GATDGSFTRP WSLMAGSSQP IMASVDMFQY C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795969.11e-110bZIP transcription factor 11-like
SwissprotC0Z2L51e-40BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2H3YAN81e-108A0A2H3YAN8_PHODC; bZIP transcription factor 11-like
STRINGXP_008795969.11e-109(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.17e-41G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]