PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s963251g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 246aa    MW: 26482.3 Da    PI: 6.9556
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s963251g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000521962321354
                        HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        R+++++   +Lr ++P        +++  ++L +Av+Y+ksL
  PDK_30s963251g002 196 REKMKKMVKTLRGIIPGG-----DRMDTPAVLDEAVKYLKSL 232
                        7999999*********94.....59***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.398183232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-5190238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.03E-6192237No hitNo description
SuperFamilySSF474595.1E-8194241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-6194242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MQRDRRFFSK KASRSRGYEA GSCALDSPAG ARDTDASAAA PSFGEALTGM KHHEFPVPLN  60
GVEFQPSETC PKNFVIFDQT YNKSRVMFHP SLAHNFGSSS FGVHGAHAHE AGKSTVGDYY  120
NAGEYSSPHI EDAEDIDALL SSEEDDDVVS TGRTPGNWGG GSSPDSSCSF SDGMRSSKLK  180
FNSTNAGSGS GSERKREKMK KMVKTLRGII PGGDRMDTPA VLDEAVKYLK SLKVEVKKLG  240
VQNLDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008784424.10.0transcription factor bHLH144-like
TrEMBLA0A2H3XIS61e-180A0A2H3XIS6_PHODC; transcription factor bHLH144-like
STRINGXP_008784424.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP208333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.22e-34bHLH family protein