PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s981271g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 145aa    MW: 16709.6 Da    PI: 6.6264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s981271g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.82e-104910273128
                NAM  73 rknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        r +  +  +gyWkat  +k+v++     vg k+ + f++ ++ +  +t Wvm ey+l
  PDK_30s981271g001  49 RDRHtVDGKGYWKATDGQKRVYC---PIVGHKQDFRFHQLEHGRQLSTAWVMTEYTL 102
                        333323459**************...78**********99999999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.6561120IPR003441NAC domain
SuperFamilySSF1019411.57E-173108IPR003441NAC domain
PfamPF023651.5E-126102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MESRLPLGFH FKPTDEEILV YHFCRANSLP SPGEFVQEED LQVSGRFTRD RHTVDGKGYW  60
KATDGQKRVY CPIVGHKQDF RFHQLEHGRQ LSTAWVMTEY TLYSNASNVN THVFSPTLGG  120
PKFGAYISKE LEDGPNWPWN LDFGN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_008780765.12e-25(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2106124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-10NAC domain containing protein 83