PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_00348

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 386aa MW: 43357.8 Da PI: 7.1947

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_00348	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.4	3.8e-34	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt+eLHerFveav+qLGG+ekAtPkt++++m+v+gLtl+h+kSHLQkYRl PEQU_00348 44 KPRLKWTTELHERFVEAVNQLGGPEKATPKTVMRVMEVPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.87	41	101	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.3E-32	42	99	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.81E-17	43	99	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.6E-24	44	99	IPR006447	Myb domain, plants
Pfam	PF00249	7.3E-9	46	97	IPR001005	SANT/Myb domain
Pfam	PF14379	1.8E-22	146	190	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MYHLDQSGNR VISYRTSNPS KRNLFLASEN CPGDAGLVLS TDAKPRLKWT TELHERFVEA 60 VNQLGGPEKA TPKTVMRVME VPGLTLYHLK SHLQKYRLSK NLHVMSNGCG AMRNVIGHSV 120 APDKTSEGET IVNNMNVGSH SNTVVKINEA LQMQIEVQKR LNEQLEVQQH LQVRMEAQGK 180 YLQSVLEKAE ITLENQNLCP VGSEAAKVQI SELASNMKEI PDPHNLKVNP IQFADCSINS 240 CLTTSEGSKM DRAMHCTNMI LRAYHGNLSQ SKAQTEKNSR LEQIQSTSYR ELKGQERDPG 300 ILSMSITNQK DKDEGNNISK ALHMRREKED DYLEEPGRGR APFQQKSSEK FSDHGIGTQL 360 DLNVQDANNH AAPDYREFDL NCSSWS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MYHLDQSGNR VISYRTSNPS KRNLFLASEN CPGDAGLVLS TDAKPRLKWT TELHERFVEA  60
VNQLGGPEKA TPKTVMRVME VPGLTLYHLK SHLQKYRLSK NLHVMSNGCG AMRNVIGHSV  120
APDKTSEGET IVNNMNVGSH SNTVVKINEA LQMQIEVQKR LNEQLEVQQH LQVRMEAQGK  180
YLQSVLEKAE ITLENQNLCP VGSEAAKVQI SELASNMKEI PDPHNLKVNP IQFADCSINS  240
CLTTSEGSKM DRAMHCTNMI LRAYHGNLSQ SKAQTEKNSR LEQIQSTSYR ELKGQERDPG  300
ILSMSITNQK DKDEGNNISK ALHMRREKED DYLEEPGRGR APFQQKSSEK FSDHGIGTQL  360
DLNVQDANNH AAPDYREFDL NCSSWS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-21	43	100	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020579352.1	0.0	myb-related protein 2-like
Refseq	XP_020579361.1	0.0	myb-related protein 2-like
TrEMBL	A0A2I0VU47	1e-122	A0A2I0VU47_9ASPA; Myb family transcription factor APL
STRING	XP_008793331.1	1e-117	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3574	38	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	2e-91	G2-like family protein