PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_00378

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 176aa MW: 20275.3 Da PI: 9.7291

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_00378	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.5	1.2e-09	11	88	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA+++GFsvrk++++ +++++i+++ +vC k g+++e k + + + +r a+ ++ e +++w v+kl + Hn +l PEQU_00378 11 VYCTYAHHIGFSVRKDHTTFWTNSRNIKTKYLVCGKAGFKKELKIT-TIVKYRR--------AETRIVDE-EDNWIVKKLIESHNLSL 88 7****************************************98877.3333333........33444444.68899999999999666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.7E-7	11	88	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MVHNEKEAYE VYCTYAHHIG FSVRKDHTTF WTNSRNIKTK YLVCGKAGFK KELKITTIVK 60 YRRAETRIVD EEDNWIVKKL IESHNLSLAN PGDKHLLSYI KKISEVNANV LRSMTQSGIK 120 PKEAFNFLAQ EVGGVENLKC TKTDAFNFIQ REKRCRVENG DVNALLQLFA EGRAHV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592536.1	1e-100	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0VS86	5e-53	A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-12	FAR1-related sequence 5