PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_00574

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 165aa MW: 17823.9 Da PI: 10.1603

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_00574	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	73.1	3.9e-23	2	35	28	61
zf-Dof 28 qPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 qPryfCkaCrryWt+GG+lrn+PvGgg+rknk+s PEQU_00574 2 QPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKRS 35 9*******************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	18.324	1	34	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-17	2	34	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-12	2	34	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence Send to blast
MQPRYFCKAC RRYWTEGGSL RNIPVGGGSR KNKRSVTITS SSIPSSSSSS SFMQNPKFSI 60 AQVRDLNQVG RFGLSELEIL RGGGLEGGEM VGNNFMHKVV GLQEFRGRGL GFQVGAGGGA 120 GDHDEERLLF GSSAPRGVVF EQGRGEGGDT RQFWNEMVGN GGNNW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020600237.1	1e-116	dof zinc finger protein DOF4.6-like
TrEMBL	A0A2I0X122	3e-50	A0A2I0X122_9ASPA; Dof zinc finger protein DOF3.7

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP37779	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-17	Dof family protein