PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_00621

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 333aa MW: 38202.6 Da PI: 9.7699

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_00621	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.2	1.3e-18	186	273	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+ vGF+vrk+++++ ++++i+++++ C k+g+++e++ + ++ + +++ trt+C+a++ + d++w ++k+++ Hn +la PEQU_00621 186 HYCAYAHYVGFTVRKDHTTYWAKSKQIKSKDYICGKSGHKRESQLA-TTVKYRKTDTRTDCQAMVCYAIDVDDNWIIKKFVESHNQPLA 273 69**************************************9999.888889999***************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.1E-16	186	273	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MRFPSLLRAS NFLRRLQGLD SCSTSTSSSP ILLKLPLQSI KSSFSAAPTR QYSTGLQVSK 60 SAFGRIFPSS PRRVRYVRYP SKTRHLVLSG LVRHLVLRDP YLHVMIKEKI RVKPGPTRRA 120 KCYGLVAAFM MKLDFSLNEE FEHMNDEMNV NVFETEISRA ETDCNDPIAR SFLNTFVRDE 180 EEAYKHYCAY AHYVGFTVRK DHTTYWAKSK QIKSKDYICG KSGHKRESQL ATTVKYRKTD 240 TRTDCQAMVC YAIDVDDNWI IKKFVESHNQ PLAESGDKHL LRSSRKISEL NTNLLRSMTD 300 SGIRAADAFN FLATEVSGVE NLECTRQDAY NFI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020587208.1	1e-132	protein FAR1-RELATED SEQUENCE 5-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-12	FAR1-related sequence 5