PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00959
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 182aa    MW: 20990.2 Da    PI: 8.5933
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00959genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.44.7e-082593290
        FAR1 32 tfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                +fvC + g++++ k++  + r +ra trtg  a+++   + +++  v+k+ + HnH la
  PEQU_00959  2 DFVCGNVGFKKKLKDN-ITMRFKRADTRTGFPAMIRCVVDLEDNLSVKKFIESHNHLLA 59
                7***********9999.9999******************99***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-5259IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
KDFVCGNVGF KKKLKDNITM RFKRADTRTG FPAMIRCVVD LEDNLSVKKF IESHNHLLAE  60
DGDKRLLRFN RKMSDISADI LRSMTKSGIR TSDAFRFLAT EVGGVKNFDC TKRDAYNFIQ  120
KEIRVQIELG DTNSVILLNF LWSDEMSRID YDCFGDVIIF DTSYRLNKYN LCCAPILGVN  180
HH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596366.12e-91protein FAR1-RELATED SEQUENCE 5-like, partial
TrEMBLA0A2I0VPA57e-61A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A2I0X9W06e-60A0A2I0X9W0_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-21FAR1-related sequence 5