PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_01722

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 212aa MW: 24344.6 Da PI: 9.9058

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_01722	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29	3.4e-09	61	111	3	48
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....t 48 Y YA+++GF+vrk++s +++++ ++++fvC k g+++e k++ PEQU_01722 61 YYLYAHHIGFTVRKEHSGFWTNSKKLKTKDFVCGKTGFKKELKDTitmsyG 111 889*************************************98887554441 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.8E-7	61	110	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence Send to blast
MLVESQNTPE KHNNEMKSQN IFENNEIEQS LDAAEGYRQS PEAEKLLHAV VHNENEAYEQ 60 YYLYAHHIGF TVRKEHSGFW TNSKKLKTKD FVCGKTGFKK ELKDTITMSY GYANRKVSEM 120 LPNSASGLIY LNHIHKFAYQ IDTITRGHEL AEKLMLEAFN KIKIDVEAAM SGRASPEKSK 180 SKKKKTPSKE RNVNDPTKMR PKGKSNARLK GY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581377.1	6e-62	protein FAR1-RELATED SEQUENCE 5-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87