PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01792
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 245aa    MW: 27531.9 Da    PI: 10.2751
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01792genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.55.4e-2549143497
      DUF573   4 qrlwseeDeivlLqGlidf.kaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +++ws+ De++lLq ++d  + ++g+s +   + + + v++s+s+ v+ +q+ +KirrLK+K++   kk+k+ ++p++s+++d  +f+ls+kiWg
  PEQU_01792  49 RKIWSKADELALLQCILDNnELHHGTSIHVQAESLLKSVNNSLSSSVTLTQMNDKIRRLKQKYNATIKKVKDANKPNISNAQDAAAFDLSRKIWG 143
                 789***************95668999********************************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.5E-2349143IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDSPVQLSDK KPISRKRSTT SPTQVSKRKR KTADIIGAEG GQEKKEITRK IWSKADELAL  60
LQCILDNNEL HHGTSIHVQA ESLLKSVNNS LSSSVTLTQM NDKIRRLKQK YNATIKKVKD  120
ANKPNISNAQ DAAAFDLSRK IWGPGKEELV FADNNFKLDK VKEGIMVEKG KKSNLIVEYP  180
FLRWHAKTDH ANNALVMQSH IPIVEAKALE GSCKKLEITE IQLHMQKAKL LSLSLKLIED  240
ALEKC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11430RKRSTTSPTQVSKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020570750.10.0probable transcription factor At1g61730
TrEMBLA0A2I0XAD51e-126A0A2I0XAD5_9ASPA; Mediator-associated protein 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.15e-11DNA-binding storekeeper protein-related transcriptional regulator