PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01941
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 218aa    MW: 23230.2 Da    PI: 8.9
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01941genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000967496123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                +kC+ Cgk F++   L  H  +H
  PEQU_01941 74 HKCSLCGKAFPSYQALGGHKTSH 96
                79**********99998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139129.5E-137398IPR007087Zinc finger, C2H2
SMARTSM003550.0197496IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.26374101IPR007087Zinc finger, C2H2
SuperFamilySSF576672.47E-874149No hitNo description
PROSITE patternPS0002807696IPR007087Zinc finger, C2H2
PROSITE profilePS501579.265127149IPR007087Zinc finger, C2H2
PfamPF139123.6E-13127151IPR007087Zinc finger, C2H2
SMARTSM003550.12127149IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280129149IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010117Biological Processphotoprotection
GO:0010200Biological Processresponse to chitin
GO:0015979Biological Processphotosynthesis
GO:0035264Biological Processmulticellular organism growth
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MKSPETKLSL LPPSPSPSPS PSSSNYSSDE PKHQIKRQKK RSDPHHRSPT EEENLALCLL  60
MLSDSQSPPP NLTHKCSLCG KAFPSYQALG GHKTSHRKSA STTAAAEDRL SAGSPVASAV  120
SGSARIHQCS ICHKTFPTGQ ALGGHKRCHY DGTIGSAAGS RPPGVGFKLP PGGGFDLNLP  180
PVPEFGFEIG GRCNWISEEE DEVQSPISIK KPRLFLTT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00162DAPTransfer from AT1G27730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598892.11e-133zinc finger protein ZAT10
TrEMBLA0A2I0WVM63e-89A0A2I0WVM6_9ASPA; Zinc finger protein 1
STRINGXP_008792675.11e-55(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102236113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-44salt tolerance zinc finger