PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02191
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 208aa    MW: 23997.1 Da    PI: 5.0189
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02191genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000256082123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PEQU_02191 60 YSCTFCWREFRSAQALGGHMNVH 82
                99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.86E-65786No hitNo description
PROSITE profilePS5015710.9076087IPR007087Zinc finger, C2H2
PROSITE patternPS0002806282IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0048441Biological Processpetal development
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MDQTRNWMWE RSKNYSTKPI YFNPILTSPS SSSFDSWEEF AFAKDSSGDL WGCVWPPRSY  60
SCTFCWREFR SAQALGGHMN VHRRDRARLK LEASSPSNEE DKNFFVASSF SILPQEVSVD  120
LNLSEMDCKR KRETCGVYEV SSNCKKLKIS DDLVLGLDRK SDGEDQLQVL NSDEVLRLRT  180
CQVEELDLEL RLGDPPKVKK DCTIIMIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A7e-135582229superman protein
2l1o_A7e-135582229Transcriptional regulator SUPERMAN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571220.11e-153probable transcriptional regulator RABBIT EARS
TrEMBLA0A2I0XHZ01e-99A0A2I0XHZ0_9ASPA; Putative transcriptional regulator RABBIT EARS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP95942840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.11e-27C2H2 family protein