PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02344
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 153aa    MW: 17902.9 Da    PI: 7.1861
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02344genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.4e-09246345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WTteE + + +a   ++ +   +W +I++ ++ +++++++++++ 
       PEQU_02344  2 KWTTEENKAFEKALVDMPDDtpdRWFRISSQIP-NKSPEDVRLHYI 46
                     7*****************99*************.**********96 PP
2Myb_DNA-binding42.11.9e-1389133347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++++ +++G g+W+ I+r    +Rt+ q+ s+ qk+
       PEQU_02344  89 PWTEEEHRRFLEGLERFGRGDWRNISRWAVRTRTPTQVASHAQKF 133
                      8***************************999************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.496153IPR017930Myb domain
SMARTSM007177.8E-7151IPR001005SANT/Myb domain
CDDcd001676.69E-7249No hitNo description
Gene3DG3DSA:1.10.10.601.4E-4250IPR009057Homeodomain-like
SuperFamilySSF466892.73E-11256IPR009057Homeodomain-like
PfamPF002495.5E-8246IPR001005SANT/Myb domain
PROSITE profilePS5129416.45882138IPR017930Myb domain
SuperFamilySSF466891.24E-1784137IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-1785137IPR006447Myb domain, plants
SMARTSM007179.5E-986136IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.7E-1186129IPR009057Homeodomain-like
PfamPF002491.3E-1089132IPR001005SANT/Myb domain
CDDcd001673.83E-989133No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
AKWTTEENKA FEKALVDMPD DTPDRWFRIS SQIPNKSPED VRLHYIALLH DIALIDSGGF  60
DLYDEDEEDS GGRSPEQHPA KDGRKKGVPW TEEEHRRFLE GLERFGRGDW RNISRWAVRT  120
RTPTQVASHA QKFYLRQTVK KETKRKSIHD ITT
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596447.11e-110transcription factor DIVARICATA-like
SwissprotQ8S9H76e-45DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A482DH652e-95A0A482DH65_9ASPA; RR-type MYB transcription factor 1 (Fragment)
STRINGXP_008456608.12e-51(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28953687
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.15e-48MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]