PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_02573

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 238aa MW: 27332.8 Da PI: 6.2811

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_02573	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.2	6.4e-37	25	82	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + +cprCds ntkfCyynny+l+qPry+CkaCrryWtkGG+lrn+PvGgg+rk++++ PEQU_02573 25 TPNCPRCDSPNTKFCYYNNYCLTQPRYLCKACRRYWTKGGSLRNIPVGGGCRKSRRRD 82 568***************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-25	23	80	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.978	26	80	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.6E-30	26	80	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	28	64	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence Send to blast
MLPHYSFHPL PNTDLQWRPI VQEPTPNCPR CDSPNTKFCY YNNYCLTQPR YLCKACRRYW 60 TKGGSLRNIP VGGGCRKSRR RDSVKRTSTV PTSPSSPPTS LRPDEALETM SGGKGGSFPS 120 PDLRSLSLAQ FYTKFLNHTP DQFEQGEADL MPMMTMPFLE ESLERQSSAE IGIGEEAVLS 180 SNYVERRLME EENRFLKDEL LEVQERRGVV DYNDSYLMSL NNYELKTDLM WEVRGFSG

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020595823.1	1e-178	dof zinc finger protein DOF5.7-like
Swissprot	Q9SVC5	2e-36	DOF35_ARATH; Dof zinc finger protein DOF3.5
TrEMBL	A0A2I0W5W7	5e-54	A0A2I0W5W7_9ASPA; Dof zinc finger protein DOF3.5
STRING	XP_008779883.1	6e-40	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2659	36	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	4e-38	Dof family protein