PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02598
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TALE
Protein Properties Length: 250aa    MW: 28477.2 Da    PI: 5.7977
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02598genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.99.8e-101762112055
                 HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
    Homeobox  20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                 +k +yps++e+  L++++gL+++q+ +WF N+R ++
  PEQU_02598 176 YKWPYPSETEKIALSESTGLDQKQINNWFINQRKRH 211
                 4679*****************************885 PP
2ELK315.4e-11131152122
         ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                 ELK +Ll+KYsgyL+sL+qE+s
  PEQU_02598 131 ELKLHLLKKYSGYLSSLRQELS 152
                 9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037901.7E-8123IPR005540KNOX1
SMARTSM012563.8E-303485IPR005541KNOX2
PfamPF037916.2E-264084IPR005541KNOX2
PfamPF037894.0E-8131152IPR005539ELK domain
PROSITE profilePS5121311.139131151IPR005539ELK domain
SMARTSM011887.4E-6131152IPR005539ELK domain
PROSITE profilePS5007112.552151214IPR001356Homeobox domain
SuperFamilySSF466892.52E-19152227IPR009057Homeodomain-like
SMARTSM003891.3E-12153218IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.3E-27156216IPR009057Homeodomain-like
CDDcd000861.79E-12163215No hitNo description
PfamPF059201.4E-16171210IPR008422Homeobox KN domain
PROSITE patternPS000270189212IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001708Biological Processcell fate specification
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010089Biological Processxylem development
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MDCQKVGAPP EVVARLSTVA RELEARQLAS PSGCRRGAPA DPELDQFMEA YCNMLVKYKE  60
ELTRPVQEAM DFLRKVESQL NSLTNGVTVP FFTSADEKCE GVVSSEEDQD GSGAEAEAEV  120
PEIDPRAEDK ELKLHLLKKY SGYLSSLRQE LSKKKKKGKL PKDARQKLLN WWELHYKWPY  180
PSETEKIALS ESTGLDQKQI NNWFINQRKR HWKPSEDMQF VVMDSFHPQN AAALYMGGQF  240
LADGNYRFGP
Functional Description ? help Back to Top
Source Description
UniProtProbably binds to the DNA sequence 5'-TGAC-3'.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600067.10.0homeobox protein knotted-1-like 2 isoform X1
SwissprotO041351e-125KNAP2_MALDO; Homeobox protein knotted-1-like 2
TrEMBLA0A2I0XDV61e-163A0A2I0XDV6_9ASPA; Homeobox protein knotted-1-like 2
STRINGXP_008798922.11e-134(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40613873
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08150.14e-94KNOTTED-like from Arabidopsis thaliana