PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02696
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 133aa    MW: 15073.4 Da    PI: 6.6682
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02696genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-073312255
                HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 L+el+P++      K +Ka++L +A+eY+ksLq
  PEQU_02696  3 ALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 31
                69******8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.763130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-10141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-11259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.70E-8335No hitNo description
PfamPF000105.6E-5331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MRALQELIPH CNKSDKASML DEAIEYLKSL QLQLQIMWMR NGMAPMFLPN IQQYVNHHSM  60
ATISNPVQLP RAPSGVQSTT PETFVTNQPP ACPLQGPNSI NFSTQIHNFH LPEQYLSYLG  120
LPQMQIPPQV SEF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588138.14e-90transcription factor PIF4-like isoform X2
TrEMBLA0A2I0X3A33e-63A0A2I0X3A3_9ASPA; Transcription factor PIF4
STRINGXP_008776592.13e-40(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31073677
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.48e-23phytochrome interacting factor 3-like 6