PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03031
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 94aa    MW: 10523.2 Da    PI: 5.7814
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03031genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-111445132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g+WT+eEd +lv +++++G+g+W++++   g
       PEQU_03031 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTG 45
                     79************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-14543IPR009057Homeodomain-like
SuperFamilySSF466891.36E-9944IPR009057Homeodomain-like
PROSITE profilePS5129410.585962IPR017930Myb domain
SMARTSM007170.00921360IPR001005SANT/Myb domain
PfamPF002491.4E-91443IPR001005SANT/Myb domain
CDDcd001671.28E-71648No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MGRPPCCEKE GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGKEIPL FSSFLTLFLP  60
IRSCGSVSVS KIVITGQDLS DFSVIFWFYF LSLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22938296
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.19e-29myb domain protein 96