PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03393
Common NameMYB7
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 249aa    MW: 28257.4 Da    PI: 9.0927
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03393genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l   +k +G g+W++ ++  g+ R++k+c++rw +yl
       PEQU_03393 14 KGAWTKEEDERLTAHIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding61.32e-1967111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eEdel+++++ +lG++ W++Ia++++ gRt++++k++w+++
       PEQU_03393  67 RGNFTEEEDELIIKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-23564IPR009057Homeodomain-like
PROSITE profilePS5129415.329961IPR017930Myb domain
SMARTSM007176.8E-131363IPR001005SANT/Myb domain
SuperFamilySSF466891.54E-2913108IPR009057Homeodomain-like
PfamPF002491.0E-131461IPR001005SANT/Myb domain
CDDcd001673.76E-91661No hitNo description
PROSITE profilePS5129429.88162116IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.1E-2965116IPR009057Homeodomain-like
SMARTSM007171.4E-1866114IPR001005SANT/Myb domain
PfamPF002497.8E-1867111IPR001005SANT/Myb domain
CDDcd001679.61E-1369112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0090379Biological Processsecondary cell wall biogenesis involved in seed trichome differentiation
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MGRSPCCEKA HTNKGAWTKE EDERLTAHIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIRRKLMSSG  120
IDPATHRPLL EQQGKTTISF IKAEEKGVEF EGRGEGKKSG GEEMSVRLQR RPEGEKKKWR  180
CPDLNLELCI STPPSQMQQV LCQETAKNEE LRLCFNCRLG VKRSSECKCG GSFLGLSSGV  240
LDYRSLESN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C3e-301311626128MYB TRANSFORMING PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPossible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7694720.0KF769472.1 Phalaenopsis equestris MYB transcription factor 7 (MYB7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599272.10.0myb-related protein 308-like
SwissprotP200261e-107MYB1_HORVU; Myb-related protein Hv1
TrEMBLA0A096ZX511e-178A0A096ZX51_PHAEQ; MYB transcription factor 7
STRINGXP_008788440.11e-112(Phoenix dactylifera)
STRINGXP_008808405.11e-112(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP11637448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-94myb domain protein 4