PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03719
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bZIP
Protein Properties Length: 93aa    MW: 10988.6 Da    PI: 8.8103
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03719genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-121481057
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                +++NRe+ArrsR RK+  +eeL+  v+ L a N++L ++l++l    +
  PEQU_03719  1 MISNRESARRSRMRKQRHLEELAGQVARLRAANRQLLDKLNKLMRDQE 48
                689**************************************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-6156IPR004827Basic-leucine zipper domain
PfamPF001707.2E-10148IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.507157IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.26E-10145No hitNo description
Gene3DG3DSA:1.20.5.1704.7E-9145No hitNo description
CDDcd147021.28E-10145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MISNRESARR SRMRKQRHLE ELAGQVARLR AANRQLLDKL NKLMRDQEDA QDEKQRLSEE  60
MSELQKRLTA MLEEHCDEPN IAHIRTMILS TCS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600155.15e-60basic leucine zipper 43-like
SwissprotQ9FMC27e-15BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2I0XBR34e-38A0A2I0XBR3_9ASPA; DNA-binding protein EMBP-1
STRINGOPUNC09G12140.12e-18(Oryza punctata)
STRINGOPUNC09G12240.12e-18(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.17e-20basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]