PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_04085

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 218aa MW: 25153.9 Da PI: 9.0324

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_04085	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.6	2.2e-14	19	78	30	90
FAR1 30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++fvC + g+++e k + + + +ra trtgC a+++ + +g+w v+k+ + HnH+la PEQU_04085 19 SKDFVCGRAGFKKELKAT-QIVKYKRADTRTGCPAMIRYAVDVEGNWTVKKFIESHNHSLA 78 689*********9988.88899*********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.5E-12	19	78	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MKKKLTKYIV LTLIICQESK DFVCGRAGFK KELKATQIVK YKRADTRTGC PAMIRYAVDV 60 EGNWTVKKFI ESHNHSLANP GDKHLLRSSR KISEVNAEVL KSMTQSGIRP RDAFNFLATE 120 VGGVEKLECT KIDAFNFIQR ERRCRIENGD ANALLQFTER RAEDNMFEWD FEIDESDETT 180 ESFKWLFKTF LITLLRYDPR LCNSLVTSTP RPTNVPSV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020598366.1	1e-93	putative protein FAR1-RELATED SEQUENCE 10
TrEMBL	A0A2I0VPA5	3e-51	A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A2I0WX55	8e-52	A0A2I0WX55_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-21	FAR1-related sequence 5