PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04438
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 129aa    MW: 15069.3 Da    PI: 10.3978
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04438genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.87.2e-132632890
        FAR1 28 itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                i++++f C k g+++e +++ +k + +r  +rtgC a ++   + +g+w v+k+ + HnH+l+
  PEQU_04438  2 IKTKDFICGKVGFKKELNNN-VKVKYRRGDKRTGCSAIIRYVVDVEGNWLVKKFIERHNHHLM 63
                67899***********9999.99999**********************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-10263IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MIKTKDFICG KVGFKKELNN NVKVKYRRGD KRTGCSAIIR YVVDVEGNWL VKKFIERHNH  60
HLMANGDKNL LRSNRKMSDI NAEVLRSMTQ SEIRTSHAFN FLSTEFGGVE NIDCTKRDVY  120
NFIQREKQV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596366.18e-69protein FAR1-RELATED SEQUENCE 5-like, partial
TrEMBLA0A2I0VPA58e-40A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-14FAR1-related sequence 5