PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04522
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 192aa    MW: 22590.2 Da    PI: 5.328
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04522genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.51.3e-14321231100
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+kv+  +  +++  + +p kf +++  ++  +  + l  ++g+sW++ l y+  s  +++  GWk+Fv++n+++eg +++F++ g+s+f  +v+vf+k
  PEQU_04522  32 FVKVM--NGDFTH-KMEFPQKFSKNF-RVELID-VVELVAPNGESWDIDL-YSTFSTLFYFNCGWKDFVEENEIEEGYILLFEYAGDSSF--RVRVFDK 122
                 55666..444555.4999****9555.444443.7999************.7777778********************************..9***998 PP

                 S CS
          B3 100 s 100
                 s
  PEQU_04522 123 S 123
                 5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019369.42E-2125123IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.1E-1826124IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.63429123IPR003340B3 DNA binding domain
CDDcd100173.08E-1531121No hitNo description
SMARTSM010191.6E-1032123IPR003340B3 DNA binding domain
PfamPF023624.7E-1332122IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
VACRSMKNRC WSCKKWEQHF YWDHFQESNY RFVKVMNGDF THKMEFPQKF SKNFRVELID  60
VVELVAPNGE SWDIDLYSTF STLFYFNCGW KDFVEENEIE EGYILLFEYA GDSSFRVRVF  120
DKSGRSAAVS NPEGSSGVKQ KNEDSTLQNI QYSHLLRGAA CKELIEDEEH GAGNSCVNFY  180
FYTHYTRIFN IT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020695843.11e-63B3 domain-containing protein Os03g0622100-like
RefseqXP_028556273.11e-63B3 domain-containing protein Os03g0622100-like
TrEMBLA0A2I0VPW32e-62A0A2I0VPW3_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-19B3 family protein