PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_04695

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

MYB_related

Protein Properties

Length: 84aa MW: 9983.7 Da PI: 10.9825

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_04695	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.3e-10	31	71	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W +eE el++++++++G++ W++ a +g +++ ++k+ w+ PEQU_04695 31 KWEPEELELIKRYHAEHGPK-WRKLADVLG--KSRVHVKDAWRR 71 8***************99.****8..9*****9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.859	26	77	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.6E-9	27	80	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.28E-9	28	80	IPR009057	Homeodomain-like
SMART	SM00717	8.5E-4	28	75	IPR001005	SANT/Myb domain
Pfam	PF00249	8.5E-9	31	71	IPR001005	SANT/Myb domain
CDD	cd00167	4.52E-4	31	72	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 84 aa Download sequence Send to blast
MSIAAAALPW RPPVNTFFRA HILFERSEER KWEPEELELI KRYHAEHGPK WRKLADVLGK 60 SRVHVKDAWR RIRLPNLKKG MPSC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020578414.1	2e-46	uncharacterized protein LOC110023369
TrEMBL	A0A1D1YR75	3e-30	A0A1D1YR75_9ARAE; Cyclin-D-binding Myb-like transcription factor 1 (Fragment)
STRING	XP_006448813.1	2e-29	(Citrus clementina)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5405	26	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	4e-16	MYB_related family protein