PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04741
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GATA
Protein Properties Length: 261aa    MW: 27995.5 Da    PI: 8.4932
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04741genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-16182218135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C+ +   Tp++Rrgpdg++tLCnaCGl+++ kg+
  PEQU_04741 182 CYHCHISAkdTPMMRRGPDGPRTLCNACGLMWANKGT 218
                 99**987778************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009798.1E-114580IPR010399Tify domain
PROSITE profilePS5132014.0794580IPR010399Tify domain
PfamPF062004.5E-114979IPR010399Tify domain
PfamPF062036.7E-17107149IPR010402CCT domain
PROSITE profilePS5101713.314107149IPR010402CCT domain
PROSITE profilePS501148.682176224IPR000679Zinc finger, GATA-type
SMARTSM004013.5E-10176239IPR000679Zinc finger, GATA-type
SuperFamilySSF577163.94E-12180230No hitNo description
CDDcd002023.28E-14181224No hitNo description
Gene3DG3DSA:3.30.50.103.3E-15181223IPR013088Zinc finger, NHR/GATA-type
PROSITE patternPS003440182209IPR000679Zinc finger, GATA-type
PfamPF003202.9E-14182218IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MSENPSSPVG EEPMAGGMVA LHESAGSLAS MDGDAPTDPG LSILPHVGGS QLTLSFQGEV  60
YVFDCVSPEK VQSVLLLLGG REVAAPLPSP PTSSTNQLNK RFNFSHRVAS LMRFREKRKE  120
RNFDKKIRYD VRKEVALRMQ RNKGQFTSSK SKVEGAEPGF TGADSTSYLV AENGQPQTAS  180
ACYHCHISAK DTPMMRRGPD GPRTLCNACG LMWANKGTLR DLSKSPVPFQ PHSLESNDGH  240
GATAAGQQTA AVPSNGQQIS H
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578718.10.0GATA transcription factor 20-like
RefseqXP_020578719.10.0GATA transcription factor 20-like
SwissprotQ5Z4U57e-86GAT20_ORYSJ; GATA transcription factor 20
TrEMBLA0A2I0W9E61e-175A0A2I0W9E6_9ASPA; GATA transcription factor 24
STRINGXP_008811434.16e-97(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43253868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-73ZIM-like 1