PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_05299

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 166aa MW: 19111.5 Da PI: 7.3001

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_05299	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	33	117	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA++vGF+v+k+++++ + ++ + +++ C k g+++e +++ + +++ t tg ka+++ + + +gkw v+k+ ++HnH+l+ PEQU_05299 33 YRAYAHDVGFTVQKDRTTYWPNFKKLKIKDYICEKAGYKKEPNDT---VKFKKTDTGTGYKAMVRFHVDFEGKWIVAKFIENHNHSLV 117 9*****************9***************99877...7888999*****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.0E-15	33	117	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MQTCEATHVC NDPIAEKFLS SIIHNEEEAY ESYRAYAHDV GFTVQKDRTT YWPNFKKLKI 60 KDYICEKAGY KKEPNDTVKF KKTDTGTGYK AMVRFHVDFE GKWIVAKFIE NHNHSLVESS 120 DKHLLHSSRR ISELNADVSR SMTDSGIRAT HAYNFIVTEI GGVENL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020574582.1	2e-89	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020592540.1	5e-89	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0VPA5	3e-45	A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-11	FAR1-related sequence 5