PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05554
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 189aa    MW: 22325.8 Da    PI: 9.1531
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05554genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431.1e-132166246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46
                     +rW  eEdel+ ++v+++G ++W+ + ++++ + R++ +c+ rw +
       PEQU_05554 21 KRWRSEEDELIRKYVEEYGDNDWRYVEQRFPdLSRSRTSCRKRWKS 66
                     69******************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.771572IPR017930Myb domain
SuperFamilySSF466891.2E-1617105IPR009057Homeodomain-like
SMARTSM007173.3E-91970IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.8E-162277IPR009057Homeodomain-like
CDDcd001675.55E-82265No hitNo description
PfamPF139213.1E-132383No hitNo description
PROSITE profilePS500905.18169125IPR017877Myb-like domain
SMARTSM007172773127IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-678123IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MRRPRAKRNH DTESAQRRKH KRWRSEEDEL IRKYVEEYGD NDWRYVEQRF PDLSRSRTSC  60
RKRWKSALQS TVAQHPFSPE EKTRIRGLYR MLGGKWRQIK NVLWGDESPV KRTECDIRNN  120
INQILLEQSH DQHCSPTVHS IRSSSDIDND AWKHASDMGN INQKYEETSS VGDPSLDVSL  180
PIPVSGEEH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589416.11e-139transcription factor MYB114-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26950.12e-15myb domain protein 104