PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_05555

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

MYB_related

Protein Properties

Length: 172aa MW: 20654.7 Da PI: 5.7402

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_05555	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.5	1.3e-12	19	60	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +rW+ eEdell ++v+++G ++W+ + ++ R + c++rw PEQU_05555 19 MRWSSEEDELLRKYVEEHGEKNWRQVEYYFK--RPKEACRDRWK 60 59**************************7..9*******7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	16.71	13	67	IPR017930	Myb domain
SuperFamily	SSF46689	7.7E-17	15	98	IPR009057	Homeodomain-like
SMART	SM00717	1.3E-8	17	65	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	5.0E-15	20	71	IPR009057	Homeodomain-like
CDD	cd00167	2.57E-10	20	60	No hit	No description
Pfam	PF13921	9.4E-15	21	78	No hit	No description
PROSITE profile	PS50090	4.24	64	132	IPR017877	Myb-like domain
SMART	SM00717	1.5	68	134	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.3E-5	72	127	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MSPRTLSISE RERMSRRYMR WSSEEDELLR KYVEEHGEKN WRQVEYYFKR PKEACRDRWK 60 YCLRSTVAQH PFTDEEKTRI RQLYHRFGAN WDNLRRYVGL LSCNSIYHTQ GDPRFPTPRT 120 VCDIKNYIDQ VLLERAQDQD LNPDDVNDNN GNQEAPGEDF DRDNEEAGSP GN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020589685.1	1e-114	transcription factor MYB114-like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26950.1	2e-10	myb domain protein 104