PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05556
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 114aa    MW: 13966.2 Da    PI: 8.3052
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05556genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.5e-07344346
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      WT+eEde l  +v+  G  +W+   r +   R++  c+ rw+ 
       PEQU_05556  3 QWTPEEDEVLRMYVAANGEYDWRGTERLLK--RSRMGCRQRWRY 44
                     7*****************99****888887..66666*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.58150IPR017930Myb domain
SuperFamilySSF466891.86E-12375IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-14379IPR009057Homeodomain-like
CDDcd001677.89E-6446No hitNo description
PfamPF139211.8E-10460No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MKQWTPEEDE VLRMYVAANG EYDWRGTERL LKRSRMGCRQ RWRYNLRSTV TQHPLTDEEK  60
TVIWQLYENL GARFDTIRRR VSLLFINLEQ ILPIIYYLIC LCFFGFICFQ LIYD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589689.11e-53transcription factor MYB11-like isoform X1
RefseqXP_020589690.11e-53transcription factor MYB11-like isoform X2
RefseqXP_020591634.11e-53transcription factor MYB11-like isoform X1
RefseqXP_020591635.11e-53transcription factor MYB11-like isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62610.12e-13myb domain protein 11