PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_05657

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 223aa MW: 25182.7 Da PI: 9.0661

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_05657	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	96	5.8e-30	13	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp+G++F+Ptd el+ e+L+ k+ k + ++e+i+++d i++++P++Lp vk++ + +fF +++++yatg +k+r+ ++ +W PEQU_05657 13 LPAGVKFDPTDVELL-EHLAGKAGVGKskahIFIDEFIPTLDgehgICYTHPENLP-GVKKDGSGAHFFYRTSNAYATGCKKRRKirseysesEERVRW 109 799**********.899999877763444333345655555666******.7778899*****************85666666555889 PP NAM 84 katgkdkevlskkgelvglkktLvfyk..grapkgektdWvmheyrl 128 ++tgk+k+v++ +g ++g kk++v+yk g+ k+ k++Wvmh+y+l PEQU_05657 110 HKTGKTKPVVE-NGFQKGWKKIMVLYKsfGKGCKPDKANWVMHQYHL 155 *********.999*******6446888999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-34	4	174	IPR003441	NAC domain
PROSITE profile	PS51005	29.301	13	174	IPR003441	NAC domain
Pfam	PF02365	6.8E-13	14	155	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
MSELQVSLDW PGLPAGVKFD PTDVELLEHL AGKAGVGKSK AHIFIDEFIP TLDGEHGICY 60 THPENLPGVK KDGSGAHFFY RTSNAYATGC KKRRKIRSEY SESEERVRWH KTGKTKPVVE 120 NGFQKGWKKI MVLYKSFGKG CKPDKANWVM HQYHLGTDEE EKDGEFVVSK VFYQQHTKQV 180 DRADTETLLN ELVSSNIKCG PRTPKTVAPE PPRAKMNSLS IYI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	94	KKRRK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269\|PubMed:25265867, ECO:0000269\|PubMed:25535195}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020575846.1	1e-163	NAC domain-containing protein 10-like isoform X2
Refseq	XP_020575847.1	1e-163	NAC domain-containing protein 10-like isoform X2
Swissprot	Q9M0F8	4e-76	NAC75_ARATH; NAC domain-containing protein 75
TrEMBL	A0A2I0BEC9	1e-109	A0A2I0BEC9_9ASPA; NAC domain-containing protein 8
STRING	EOY02531	1e-106	(Theobroma cacao)
STRING	XP_008775622.1	1e-106	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2110	37	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	3e-71	NAC domain containing protein 75

Publications ? help Back to Top
Droc G, et al. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Res., 2006. 34(Database issue): p. D736-40 [PMID:16381969] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195]