PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05713
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 249aa    MW: 27025.7 Da    PI: 7.2102
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05713genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00043158180123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +Cg  Fs+   L  H+r+H
  PEQU_05713 158 HECLICGSEFSSGQALGGHMRRH 180
                 78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.6494121IPR007087Zinc finger, C2H2
PfamPF139123.1E-1094118IPR007087Zinc finger, C2H2
SuperFamilySSF576677.21E-694116No hitNo description
SMARTSM003550.694116IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028096116IPR007087Zinc finger, C2H2
SuperFamilySSF576677.21E-6153180No hitNo description
PfamPF139122.1E-10157182IPR007087Zinc finger, C2H2
PROSITE profilePS501579.265158185IPR007087Zinc finger, C2H2
SMARTSM003550.11158180IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280160180IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
LYFFPLHSMD STEEAMVNPH VLKGRRTKRQ RHLPVAAAPA SSSSSEEEDM ANCLILLAQG  60
PPPDSAIKET EEIGAEKKPS RGVTGFGKAG FFLHECRTCN KCFPSYQALG GHRTSHKKPK  120
LTIPSVGEDQ TGEIGKELIQ LNINSFSNSK IGKIARVHEC LICGSEFSSG QALGGHMRRH  180
RQTSMPETVE EKKAEKSSIV MTLDLNLPAS DDDYCCSGGG ELPTSSSTFS FASKPPLLMS  240
TSALVDCFY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574738.11e-179zinc finger protein ZAT5-like
TrEMBLA0A2I0X4S24e-78A0A2I0X4S2_9ASPA; Zinc finger protein ZAT5
STRINGXP_008807698.14e-67(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.13e-38C2H2 family protein