PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_05901

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 216aa MW: 24394.8 Da PI: 10.9427

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_05901	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	145	198	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PEQU_05901 145 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 198 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	7.88E-16	142	199	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.6E-29	143	198	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.5E-24	145	198	IPR006447	Myb domain, plants
Pfam	PF00249	2.6E-7	146	197	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MELFPAHPDL SLQISPPNGN KPSSKWNNTT ETEAMHLEFW SKAFDANSTT TSTASKSSVA 60 TASFDLSLSN QTLSNRHSLF LHEPHHGKDL SFLRPIRGIP VYHSPPSFPF PQQNQRLNYP 120 LDSSRISPSS RFLPRFPVKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD 180 VKDLTLAHVK SHLQMYRTVK TTDKPLTGTT AKFRAP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-17	146	200	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	146	200	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	146	200	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	146	200	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020574814.1	1e-151	probable transcription factor KAN2 isoform X1
Refseq	XP_020574815.1	1e-151	probable transcription factor KAN2 isoform X2
TrEMBL	A0A2I0WNL5	1e-109	A0A2I0WNL5_9ASPA; Putative transcription factor KAN2
STRING	XP_007158256.1	1e-71	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9438	34	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-45	G2-like family protein