PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06044
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bZIP
Protein Properties Length: 144aa    MW: 16307.6 Da    PI: 9.6334
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06044genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.6e-142985460
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                 k+ +r+ +NRe+ArrsR+RK++ ++ L   v +L++ N + + +l+  ++++  ++
  PEQU_06044 29 QKKRKRMLSNRESARRSRLRKQKHLDDLMAQVSQLKKDNGQIITTLNLRTQHYLVVE 85
                6999***************************************99998888876555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-102370No hitNo description
SMARTSM003381.2E-162690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9212870IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-123081No hitNo description
PfamPF001701.1E-113075IPR004827Basic-leucine zipper domain
CDDcd147021.34E-183181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
SMASTSSGSS NLLPNSGSEA EVLQALMDQK KRKRMLSNRE SARRSRLRKQ KHLDDLMAQV  60
SQLKKDNGQI ITTLNLRTQH YLVVEAENSV LRTQTMELCS RLSSLNEILH CIGGETQSPW  120
NFLSMNQQPV MASSDIIQYY MMTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14248RRSRLRK
24249RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573917.11e-102bZIP transcription factor 11-like
SwissprotC0Z2L59e-38BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2I0VIA51e-62A0A2I0VIA5_9ASPA; Ocs element-binding factor 1
STRINGXP_008795969.18e-50(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.13e-37G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]