PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06088
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 245aa    MW: 28360 Da    PI: 7.1415
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06088genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.62.4e-53101381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhP+deel+++yL+kkv ++k+++  ++ evd++ +ePw+Lp+++k + +ewyfFs rd+kyatg+r+nrat+sgyWkatgkd++v+++ +++
  PEQU_06088  10 LPPGFRFHPSDEELICHYLHKKVVNEKVSE-GTLVEVDLHALEPWELPEMAKLSPNEWYFFSFRDRKYATGSRTNRATRSGYWKATGKDRTVHNHrTHS 107
                 79*************************999.88***************88888999*************************************985677 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                 +vg++ktLvfy+grap+g kt+Wvmhe+rle
  PEQU_06088 108 TVGMRKTLVFYHGRAPNGLKTNWVMHEFRLE 138
                 8***************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-618156IPR003441NAC domain
PROSITE profilePS5100559.27910156IPR003441NAC domain
PfamPF023654.6E-2911137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MGLREVESTL PPGFRFHPSD EELICHYLHK KVVNEKVSEG TLVEVDLHAL EPWELPEMAK  60
LSPNEWYFFS FRDRKYATGS RTNRATRSGY WKATGKDRTV HNHRTHSTVG MRKTLVFYHG  120
RAPNGLKTNW VMHEFRLETP HSPPKEDWVL CRVFHKRKVE GVKESAMNGY NNTTSPTLEY  180
LSPTFSSDQL PLGSQEMNWC SLSTSPCKKN DHDSNFIQNL MDCNGIVSLE QLGFSLEEMN  240
NDIYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-5211577169NAC domain-containing protein 19
3swm_B2e-5211577169NAC domain-containing protein 19
3swm_C2e-5211577169NAC domain-containing protein 19
3swm_D2e-5211577169NAC domain-containing protein 19
3swp_A2e-5211577169NAC domain-containing protein 19
3swp_B2e-5211577169NAC domain-containing protein 19
3swp_C2e-5211577169NAC domain-containing protein 19
3swp_D2e-5211577169NAC domain-containing protein 19
3ulx_A2e-5211571169Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574015.10.0NAC domain-containing protein 21/22-like
SwissprotQ84TE69e-66NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLA0A2I0XD991e-138A0A2I0XD99_9ASPA; NAC domain-containing protein 100
STRINGXP_008810507.11e-101(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.17e-80NAC domain containing protein 74
Publications ? help Back to Top
  1. Le Hénanff G, et al.
    Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
    J. Exp. Bot., 2013. 64(16): p. 4877-93
    [PMID:24043850]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  4. Huo X,Wang C,Teng Y,Liu X
    Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
    BMC Plant Biol., 2015. 15: p. 266
    [PMID:26530097]
  5. Chen X, et al.
    Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
    Plant Physiol., 2016. 170(4): p. 2136-45
    [PMID:26850273]
  6. Liu C,Wang B,Li Z,Peng Z,Zhang J
    TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
    Plant Physiol., 2018. 176(1): p. 742-756
    [PMID:29122985]