PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06107
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 200aa    MW: 23790 Da    PI: 9.3357
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06107genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-183890456
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++++++eq++ Le  F+++r++  +++e LA++lgL+ +qV vWFqNrRa+ k
  PEQU_06107 38 KRRLSDEQVKLLEFSFRRERKLECRRKESLAMELGLDPKQVAVWFQNRRARLK 90
                4579***********************************************98 PP
2HD-ZIP_I/II107.31.1e-3437128293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +krrls+eqvklLE sF++e+kLe +rK++la eLgl+p+qvavWFqnrRAR k++++E++y +Lk++ d+ + e+++Lekev +L+e+l+e
   PEQU_06107  37 RKRRLSDEQVKLLEFSFRRERKLECRRKESLAMELGLDPKQVAVWFQNRRARLKSRKIEEEYWRLKSENDEAVIEKCQLEKEVLKLKEKLSE 128
                  8***************************************************************************************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.3583292IPR001356Homeobox domain
SMARTSM003893.2E-143596IPR001356Homeobox domain
SuperFamilySSF466894.71E-163593IPR009057Homeodomain-like
CDDcd000862.28E-123793No hitNo description
PfamPF000461.5E-153890IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-173997IPR009057Homeodomain-like
PRINTSPR000311.0E-56372IPR000047Helix-turn-helix motif
PROSITE patternPS0002706790IPR017970Homeobox, conserved site
PRINTSPR000311.0E-57288IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MMVESYLMSS GLTDNTPQGG RRWRRQKKAE VRAVEGRKRR LSDEQVKLLE FSFRRERKLE  60
CRRKESLAME LGLDPKQVAV WFQNRRARLK SRKIEEEYWR LKSENDEAVI EKCQLEKEVL  120
KLKEKLSETE EEIKRLSIDT KRDENNSKAM ENSSPSFSAM NQQAVAKDIN AGGEQEYFIF  180
KHDFMYSNYW LSWGDDLFGM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574037.11e-145homeobox-leucine zipper protein ATHB-21-like
TrEMBLA0A2I0VRY42e-84A0A2I0VRY4_9ASPA; Homeobox-leucine zipper protein ATHB-21
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP200638101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18550.11e-23homeobox protein 21