PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06551
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family BBR-BPC
Protein Properties Length: 148aa    MW: 16517.5 Da    PI: 10.1194
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06551genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind153.82.9e-479143159296
   GAGA_bind 159 pkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiag 257
                 + +++ ++ +++ ++s++++++++  ++ ++ek+  +  + g s D s++P+PvCsCtG+ r C k+ +GGW S+CCt ++S yPLP ++ r+  Ri g
  PEQU_06551   9 TNVPTPNESENQASASRNNNEAST--STENREKNREESIVHGGSTDFSRVPIPVCSCTGVRRECHKF-AGGWRSTCCTASLSEYPLPFTSSRPKKRIMG 104
                 333333333333333433333333..45666777777789999***********************9.7****************************** PP

   GAGA_bind 258 rKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnk 296
                 r + ++a+kk+Le+LaaeG+dl   vDLk+hWA+ G n+
  PEQU_06551 105 RSITKAAYKKILERLAAEGHDLLWGVDLKNHWARAGANQ 143
                 *************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012264.3E-81145IPR010409GAGA-binding transcriptional activator
PfamPF062171.0E-438143IPR010409GAGA-binding transcriptional activator
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MNKEKEAATN VPTPNESENQ ASASRNNNEA STSTENREKN REESIVHGGS TDFSRVPIPV  60
CSCTGVRREC HKFAGGWRST CCTASLSEYP LPFTSSRPKK RIMGRSITKA AYKKILERLA  120
AEGHDLLWGV DLKNHWARAG ANQHKRFK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598248.11e-100protein BASIC PENTACYSTEINE7-like, partial
SwissprotO822864e-35BPC7_ARATH; Protein BASIC PENTACYSTEINE7
TrEMBLA0A2H3XTM72e-43A0A2H3XTM7_PHODC; protein BASIC PENTACYSTEINE7 isoform X2
STRINGXP_008788595.11e-43(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2077767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.42e-37basic pentacysteine 7