PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06673
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GRAS
Protein Properties Length: 143aa    MW: 16024.6 Da    PI: 9.248
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06673genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS27.44e-0951134157246
        GRAS 157 eleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqea 246
                 e +etg++ + fA+++ ++f+f     +r +++++ + +v +g a++ n++   h+ +++++ ++s    +L    +  +kvv +ve+e 
  PEQU_06673  51 EKKETGRKPTAFAASISLSFSFAQCRLDRKDCFRPTAVKVLNGKAIVFNCAP--HHKHHSPALIRS----FLTSTAEFGAKVVALVEEEG 134
                 5689********************9999**********************99..444434555555....******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.4E-651134IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
QGSSQLRCGL PGLQFDDPRL CVVDEWRVHI VDFDIRRELS GLRLCRLLCR EKKETGRKPT  60
AFAASISLSF SFAQCRLDRK DCFRPTAVKV LNGKAIVFNC APHHKHHSPA LIRSFLTSTA  120
EFGAKVVALV EEEGWAMAAE RKG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020586762.13e-42nodulation-signaling pathway 2 protein-like
TrEMBLA0A2I0W1D65e-26A0A2I0W1D6_9ASPA; Nodulation-signaling pathway 2 protein
STRINGXP_004292683.11e-20(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-09GRAS family protein