PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06844
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ZF-HD
Protein Properties Length: 287aa    MW: 31773.3 Da    PI: 8.8152
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06844genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.17.6e-3287141459
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  v+Y+eClkNhAas+Gg+a+DGCgEfmp  geegt +alkC+AC+CHRnFHR+e + 
   PEQU_06844  87 VKYRECLKNHAASIGGNATDGCGEFMPC-GEEGTLEALKCSACNCHRNFHRKEIDG 141
                  79*************************9.999********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.0E-2887139IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257747.0E-2487145IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015666.3E-3088139IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.71589138IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466896.65E-19209279IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-29210280IPR009057Homeodomain-like
TIGRFAMsTIGR015651.2E-25218274IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048574Biological Processlong-day photoperiodism, flowering
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
KEKMDISGHE GEMPIPISSS YVGGGGGHGQ NQSHTSHFIH HEAPSLHQLK LHQSNGPSPP  60
PPPPPPHQAP TPISVAAPLN SKKGVLVKYR ECLKNHAASI GGNATDGCGE FMPCGEEGTL  120
EALKCSACNC HRNFHRKEID GELSSCDLFH YKGGRKMMSQ KGLLISATDP FGFNSGGNNL  180
IPRPSHQMIM PFGAIQTSES DEMEGFGGGV MTRPPMMKKR FRTKFTSEQK EKMLCFAEKM  240
DWRLQKQEES VIQQFCQEIG VKRRVLKVWM HNNKHNLAKK NSNLHLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A1e-232192761875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. Probably involved in the regulation of floral induction. {ECO:0000269|PubMed:22319055}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by exposure to long days. {ECO:0000269|PubMed:22319055}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584603.10.0zinc-finger homeodomain protein 4-like
SwissprotQ9M9S02e-72ZHD4_ARATH; Zinc-finger homeodomain protein 4
TrEMBLA0A2I0VS631e-153A0A2I0VS63_9ASPA; ZF-HD homeobox protein
STRINGXP_008808961.11e-132(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81535145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.22e-71homeobox protein 31