PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07162
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 205aa    MW: 22581.4 Da    PI: 8.2522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07162genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000131361254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +  + erE+  Rd++N+ f+eL   l +a     + + Ka+iL  A + +++L
  PEQU_07162 13 KIHKAEREKLKRDHLNEVFSELSHALDPA----RQNNGKATILCDAAKLLRDL 61
                567889********************998....57788899998888877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.5311161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-81280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-111281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
VPGKKIRVKV PKKIHKAERE KLKRDHLNEV FSELSHALDP ARQNNGKATI LCDAAKLLRD  60
LITQVESLKK ENLALQNESH YVTVEKNELE DDNAALQGDI NRLQNKIQES MRHEPPSPLS  120
EPNCSALPQQ QSSSVAPVFV VPLSQDLQQA LADVTGPSSS PKPSSQISRP HARYPTPDSW  180
SLEFLSRSLQ ASGAASNGWL GVDKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575582.11e-148transcription factor bHLH47-like
TrEMBLA0A2I0V9K81e-115A0A2I0V9K8_9ASPA; Transcription factor bHLH47
STRINGXP_008808049.12e-61(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-34bHLH family protein