PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07232
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 243aa    MW: 26850.1 Da    PI: 4.4646
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07232genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-1888137554
                 SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox   5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 +++ ++q+++Le++Fe +++++ e++++LA++lgL+ rqV vWFqNrRa+
  PEQU_07232  88 RRLGTDQVRALERCFEIENKLDPERKARLAQELGLQPRQVAVWFQNRRAR 137
                 467789*******************************************8 PP
2HD-ZIP_I/II851e-2786138254
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 
                  kkrrl ++qv++LE++Fe e+kL+perK++la+eLglqprqvavWFqnrRAR 
   PEQU_07232  86 KKRRLGTDQVRALERCFEIENKLDPERKARLAQELGLQPRQVAVWFQNRRARL 138
                  9***************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.01E-1780138IPR009057Homeodomain-like
SMARTSM003891.9E-1784145IPR001356Homeobox domain
PROSITE profilePS5007115.32186141IPR001356Homeobox domain
PfamPF000466.3E-1688137IPR001356Homeobox domain
CDDcd000866.81E-1693138No hitNo description
Gene3DG3DSA:1.10.10.601.1E-1893137IPR009057Homeodomain-like
PRINTSPR000313.7E-6112121IPR000047Helix-turn-helix motif
PRINTSPR000313.7E-6121137IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MPPESYFLLI TPLFSNFPSG HEFRPELFHQ SAILAPQNMK RPAATDSIIA PFYSSEERGE  60
MMPEEEDEDD EICCGGGGGG GGGGLKKRRL GTDQVRALER CFEIENKLDP ERKARLAQEL  120
GLQPRQVAVW FQNRRARLGP IAAAKHESVL AAAKQEEEKM EVVRPLAPPP MLGDGSSDSD  180
SSVVLTDDNR LEGGIVYQAQ QMFKMEEHSF FGGEEPCSSA FFSDEHVPTL AWFCNDLNSA  240
GGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110116ERKARLA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575499.11e-110homeobox-leucine zipper protein HOX20-like
TrEMBLA0A2I0W6293e-93A0A2I0W629_9ASPA; Homeobox-leucine zipper protein HOX20
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.13e-21homeobox protein 16