PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_07434

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 220aa MW: 23863.8 Da PI: 8.032

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_07434	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.6	3.8e-35	11	66	5	60
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 lkcprC+stntkfCyynnys sqPr+fC+aCrr+Wt+GG+lrn+P+Gg+r+++++ PEQU_07434 11 LLKCPRCESTNTKFCYYNNYSRSQPRHFCRACRRHWTEGGTLRNIPIGGSRKNKRR 66 689********************************************987655544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-20	1	59	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.0E-31	12	65	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.242	12	66	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	14	50	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence Send to blast
KGQEEKNSAP LLKCPRCEST NTKFCYYNNY SRSQPRHFCR ACRRHWTEGG TLRNIPIGGS 60 RKNKRRKTTP TTTSSVSTSA ANPIAPVIEE MKGSIFPNIL RQALLLPPPP PLQSPTIDGL 120 NGLFSTSLPN ASLMFMEDLN GMSSGLVSPS CSFSSQYSWR GVQGVGGGCK DGLLGTMDAT 180 TASTWEMKET GFPASYWDYW DGGSGDLNDA DAGEVDPLLP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020577457.1	1e-162	dof zinc finger protein DOF3.1-like
TrEMBL	A0A2I0VLB8	4e-92	A0A2I0VLB8_9ASPA; Dof zinc finger protein DOF5.3
STRING	XP_008790500.1	7e-40	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38000.1	7e-27	DNA binding with one finger 4.7