PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07496
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 107aa    MW: 12124.2 Da    PI: 8.2086
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07496genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.51.2e-138821898
                --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +pk+f e   ++       ++   + ++W  k+  r ++++ ++ +GWk+Fv +n+Lk gD +vF+l++ +e +++v++++
  PEQU_07496  8 IPKSFSEFLPSS----SAWIILCCREKEWAAKC--RVSQSAKFINEGWKQFVLDNNLKIGDGCVFELMNIKELRFRVQILS 82
                566665433222....23444556789******..99999999***********************998799999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.998184IPR003340B3 DNA binding domain
SMARTSM010190.0015484IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.4E-15781IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-13781IPR015300DNA-binding pseudobarrel domain
CDDcd100178.40E-13882No hitNo description
PfamPF023629.8E-12882IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MLIICQKIPK SFSEFLPSSS AWIILCCREK EWAAKCRVSQ SAKFINEGWK QFVLDNNLKI  60
GDGCVFELMN IKELRFRVQI LSGELPVSPT TDIFTRGNSI DTPILIG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577614.19e-69B3 domain-containing protein Os04g0386900-like
TrEMBLA0A2I0VZA21e-38A0A2I0VZA2_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP89543545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-11B3 family protein